BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F06LP1|AL425404
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 1896 0.0
>3x_Contig1493
Length = 12243
Score = 1896 bits (956), Expect = 0.0
Identities = 978/982 (99%), Gaps = 3/982 (0%)
Strand = Plus / Plus
Query: 1 gatccgtggttagttcacgtgacagatgtcggcacccatggcaactcgccaactcgattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5705 gatccgtggttagttcacgtgacagatgtcggcacccatggcaactcgccaactcgattg 5764
Query: 61 gcaacgattggcttccggccggtcgaaggccggnaaaaaagaaccaactacgggtctgtt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5765 gcaacgattggcttccggccggtcgaaggccgg-aaaaaagaaccaactacgggtctgtt 5823
Query: 121 tccaatccaatcttcaacattgggtgcatattgctttgagcgagaatatccgattgggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5824 tccaatccaatcttcaacattgggtgcatattgctttgagcgagaatatccgattgggtt 5883
Query: 181 ccgcaccagctaattttctccaacttaaactttcaatctccttttgcaccccgaaaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5884 ccgcaccagctaattttctccaacttaaactttcaatctccttttgcaccccgaaaaact 5943
Query: 241 aaaggagaaaaacatgcaaaacattactacttttgtgtggcgcaggatgtgtcactggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5944 aaaggagaaaaacatgcaaaacattactacttttgtgtggcgcaggatgtgtcactggat 6003
Query: 301 gtcgtatatgttttccatatcttcaggtacataggatgtactaaagcgggaagcacataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6004 gtcgtatatgttttccatatcttcaggtacataggatgtactaaagcgggaagcacataa 6063
Query: 361 gaacatgcatgacttttgaagaaggacataagaagaagtacgggtaacagtgattctatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6064 gaacatgcatgacttttgaagaaggacataagaagaagtacgggtaacagtgattctatt 6123
Query: 421 gccactactaatacaagttcaagctcaagaaattctatcacctcctggttgactgacact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6124 gccactactaatacaagttcaagctcaagaaattctatcacctcctggttgactgacact 6183
Query: 481 gactgaaaaagactgtaaagatcacacagggaaactgatcgaacaatcaacatgtcaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6184 gactgaaaaagactgtaaagatcacacagggaaactgatcgaacaatcaacatgtcaaac 6243
Query: 541 aaagagaatctagatcgtccagattagttatcatgcatcatacatagaatctcggtagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6244 aaagagaatctagatcgtccagattagttatcatgcatcatacatagaatctcggtagac 6303
Query: 601 gacacttttggcaaaaaaaaaagataagacagtagaataaaaatcctggtaaaaaccgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6304 gacacttttggcaaaaaaaaaagataagacagtagaataaaaatcctggtaaaaaccgat 6363
Query: 661 cggaacatatccgtctaagacacctcagaaataccgttcccttcaaatgaactaaagtaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6364 cggaacatatccgtctaagacacctcagaaataccgttcccttcaaatgaactaaagtaa 6423
Query: 721 tcatcgggaaggtgtgagaatacaaacaaataggataaactaggaacaaggcattaacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6424 tcatcgggaaggtgtgagaatacaaacaaataggataaactaggaacaaggcattaacct 6483
Query: 781 aacccgttcatttgtttttcagtcgcgacattcttgtgctgttatttgttttgggtgtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6484 aacccgttcatttgtttttcagtcgcgacattcttgtgctgttatttgttttgggtgtgg 6543
Query: 841 aaatttcttttaggtaagggcttcaaaagaaaagacaacaacaaacaaacagatggttcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6544 aaatttcttttaggtaagggcttcaaaagaaaagacaacaacaaacaaacagatggttcc 6603
Query: 901 aggt-aaaaccactgcagggatatggaaagtttaagaaataaagccaaattaaggtgaat 959
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6604 aggtaaaaaccactgcagggatatggaaagtttaagaaataaagccaaattaaggtgaat 6663
Query: 960 ggtagtgt-attgcmagtgacc 980
|||||||| ||||| |||||||
Sbjct: 6664 ggtagtgtaattgcaagtgacc 6685
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8374
Number of Sequences: 1807
Number of extensions: 8374
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)